Micro Optical - Imaging Systems Laboratory (MO-ISL) at the University of Colorado, Boulder
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           Quantitative Differential Interference Contrast (DIC) Microscopy

              Sharon King, Ariel Libertun, and Carol Cogswell


We propose to develop a high-sensitivity quantitative imaging system that should provide an alternative to fluorescence  labeling  for a  range of  contemporary  live-cell investigations.   Our previous theoretical and experimental investigations demonstrate that DIC has the potential to provide much more information to
biologists than is currently the case in its present commercially available form.  [More]                                            
   
 Funding:   


Publications:

                       Quantitative  phase microscopy through differential interference imaging
                       Sharon V. King, Ariel R. Libertun,  Rafael Piestun, Chrysanthe Preza, and Carol J. Cogswell
                       Journal of Biomedical optics, Vol. 13, Issue 2 (2008)   
                       Virtual Journal of Biological Physics Research (May, 2008)

                       Algorithms for extracting true phase from rotationally-diverse and phase-shifted DIC images
                       Proceedings of SPIE, 6090, January 2006   


                        A Phase-Shifting DIC Technique for Measuring 3D Phase Objects: Experimental Verification
                        Proceedings of SPIE, 5324, 191-196, January 2004




Three dimensional imaging with rotating point spread functions

Sri Rama Prasanna Pavani and Rafael Piestun



We design efficient diffractive optical elements to generate rotating point spread functions for incoherent three-dimensional computational imaging systems. Higher diffraction efficiency is important for increasing signal-to-noise and accuracy. [More]

 
Funding:                   

Publications:

                 Tracking of fluorescent microspheres in three dimensions using an efficient rotating point spread function
                       Sri Rama Prasanna Pavani and Rafael Piestun
                 (in preparation)

                 3D localization with nanometer accuracy using high-efficiency rotating point spread functions
                       Sri Rama Prasanna Pavani, Adam Greengard, and Rafael Piestun
                 (to be submitted)

                 3D localization of fluorescent microparticles using a rotating point spread function
                 Sri Rama Prasanna Pavani and Rafael Piestun
                 OSA Frontiers in Optics (FiO), Rochester, USA, Oct. 2008  (submitted)

                 High-efficiency rotating point spread functions
                       Sri Rama Prasanna Pavani and Rafael Piestun
                 Optics Express, vol. 16 issue 5, 3484-3489 (2008)
                       Virtual Journal for Biomedical Optics, Vol. 3 Issue 4 (2008)

                       Passive 3D imaging with quasi-rotating PSFs
                       Sri Rama Prasanna Pavani and Rafael Piestun
                       OSA Digital Holography and 3D imaging, St. Petersburg, USA, Mar. 2008

                       Efficient rotating point spread functions for 3D imaging
                       Sri Rama Prasanna Pavani and Rafael Piestun
                       OSA Frontiers in Optics, San Jose, USA, Sept. 2007

                      Efficient diffractive optical elements for depth from diffracted rotation systems
                      Sri Rama Prasanna Pavani and Rafael Piestun
                      OSA Computational Optical Sensing and Imaging (COSI), Vancouver, Canada, June 2007




Structured Illumination Quantitative phase microscopy   
Sri Rama Prasanna Pavani, Ariel Libertun, Sharon King, and Carol Cogswell


Phase only objects like transparent cells do not  absorb light,  and therefore are almost  invisible  to traditional bright field transmission microscopes having square law intensity detectors.  We propose two simple additions to a traditional bright field microscope for accomplishing quantitative phase imaging.  [More]

 Funding:     


Publications:

                       Quantitative structured-illumination phase microscopy
                       Sri Rama Prasanna Pavani, Ariel R. Libertun, Sharon V. King, and Carol J. Cogswell
                       Applied Optics, vol. 47 issue 1, 15-24 (2008)
                       Virtual Journal for Biomedical Optics, Vol. 3 Issue 2 (2008)

                      QSIP: Phase imaging made possible in a bright field microscope
                      Sri Rama Prasanna Pavani, Ariel R. Libertun, Sharon V. King, and Carol J. Cogswell
                      SPIE Photonics West (BIOS), San Jose, USA, 2008 

                      Quantitative phase estimation with a brightfield microscope
                      Sri Rama Prasanna Pavani, Ariel R. Libertun, and Carol J. Cogswell
                      OSA Frontiers in Optics, San Jose, USA,  Sept. 2007

                       Structured-illumination quantitative phase microscopy
                      Sri Rama Prasanna Pavani, Ariel R. Libertun and Carol J. Cogswell
                      OSA Computational Optical Sensing and Imaging (COSI), Vancouver, Canada,  June 2007




Wavefront Coding
Sharon King, Sri Rama Prasanna Pavani, Carol Cogswell, and W. Thomas Cathey


We have designed an optical/digital system that delivers near diffraction limited imaging performance with a large depth  of  field.  This  system  is  the  standard  incoherent  optical  system   modified  by a  phase  mask, with digital processing of the resulting intermediate image. The phase mask alters or codes the received incoherent wavefront in such a way that the PSF and OTF do not appreciably change as a function of misfocus. Focus independent digital filtering of the intermediate image is used to produce a combined optical/digital system that has a nearly diffraction limited PSF.  [
More]

 Funding:  

Publications:







NSF Disclaimer: This material is based upon work supported by the National Science Foundation under Grant No. 0455408. Any opinions, findings, and conclusions or recommendations expressed in this material are those of the author(s) and do not necessarily reflect the views of the National Science Foundation.

    
                       
                     The Micro Optical - Imaging Systems Laboratory is affiliated with the Optoelectronics Computing Systems Center
                               and
the Department of Electrical and Computer Engineering at the University of Colorado-Boulder.

                                                                                                     webmaster:  pavani@colorado.edu